SNPflow is a freely available web application to automatically check the quality of SNP data: Single raw output files of plates are automatically merged and converted to genotype lists. Furthermore, calculation of call rates, discordance rates, Hardy Weinberg Equilibrium (HWE) and a comparison with data from the 1000G and HapMap project are automatically accomplished.
Please contact
us, if you are interested in SNPflow - it is freely available!
more
snpflow helps you controlling your data from TaqMan and Sequenom platform.
The main advantages using snpflow:
- no inconvenient merging of result files
- avoid merging failures
- fast quality check of generated data
